Rapid dissemination of taxonomic discoveries based on DNA barcoding and morphology
نویسندگان
چکیده
The taxonomic impediment is characterized by dwindling classical taxonomic expertise, and slow pace of revisionary work, thus more rapid taxonomic assessments are needed. Here we pair rapid DNA barcoding methods with swift assessment of morphology in an effort to gauge diversity, establish species limits, and rapidly disseminate taxonomic information prior to completion of formal taxonomic revisions. We focus on a poorly studied, but diverse spider genus, Pseudopoda, from East Asia. We augmented the standard barcoding locus (COI) with nuclear DNA sequence data (ITS2) and analyzed congruence among datasets and species delimitation methods for a total of 572 individuals representing 23 described species and many potentially new species. Our results suggest that a combination of CO1 + ITS2 fragments identify and diagnose species better than the mitochondrial barcodes alone, and that certain tree based methods yield considerably higher diversity estimates than the distance-based approaches and morphology. Combined, through an extensive field survey, we detect a twofold increase in species diversity in the surveyed area, at 42-45, with most species representing short range endemics. Our study demonstrates the power of biodiversity assessments and swift dissemination of taxonomic data through rapid inventory, and through a combination of morphological and multi-locus DNA barcoding diagnoses of diverse arthropod lineages.
منابع مشابه
Taxonomic status of six populations of the Gobiids (Teleost, Gobiidae) in the southern Caspian Sea basin using COI gene
Morphological similarities of the populations and species of the genus Ponticola in the southern Caspian Sea make their identification difficult based on the provided keys. Molecular markers are used as a supplementary tools to better understanding of the fishes’ taxonomic statues. This study was conducted to understand taxonomic statues of gobiids from 6 rivers (Siah, Zaringol, Babol, Tajan, S...
متن کاملDNA barcoding will frequently fail in complicated groups: An example in wild potatoes.
DNA barcoding ("barcoding") has been proposed as a rapid and practical molecular method to identify species via diagnostic variation in short orthologous DNA sequences from one or a few universal genomic regions. It seeks to address in a rapid and simple way the "taxonomic impediment" of a greater need for taxonomic identifications than can be supplied by taxonomists. Using a complicated plant ...
متن کاملTaxonomic status and genetic variation of the genus Castanea (Fagaceae) in Iran based on psbA and trnH-psbA
Species in the genus Castanea Mill. are one of the worthwhile species in the Hyrcanian forest of west Guilan (N Iran) with low region such as Siahmazgi, Ghalerodkhan and Visrod. that do not have good condition by reason of human interfering and disease. They have varying economic importance as nut tree crops, therefore, DNA barcoding technique can be a straightforward method for taxonomic statu...
متن کاملA Revision of Malagasy Species of Anochetus Mayr and Odontomachus Latreille (Hymenoptera: Formicidae)
Species inventories are essential for documenting global diversity and generating necessary material for taxonomic study and conservation planning. However, for inventories to be immediately relevant, the taxonomic process must reduce the time to describe and identify specimens. To address these concerns for the inventory of arthropods across the Malagasy region, we present here a collaborative...
متن کاملHigh-throughput sequencing and morphology perform equally well for benthic monitoring of marine ecosystems
Environmental diversity surveys are crucial for the bioassessment of anthropogenic impacts on marine ecosystems. Traditional benthic monitoring relying on morphotaxonomic inventories of macrofaunal communities is expensive, time-consuming and expertise-demanding. High-throughput sequencing of environmental DNA barcodes (metabarcoding) offers an alternative to describe biological communities. Ho...
متن کامل